CDS

Accession Number TCMCG006C96005
gbkey CDS
Protein Id XP_013673311.1
Location complement(join(32687420..32687500,32687597..32687712,32687816..32687839,32687922..32687953,32688040..32688125,32688213..32688266,32688369..32688430,32688524..32688585,32688759..32688845,32688932..32689008,32689113..32689171,32689257..32689321,32689423..32689512,32689665..32689761,32689851..32689950,32690046..32690119,32690460..32690541,32690619..32690669,32690750..32690827,32691129..32691173,32691284..32691385,32691622..32691678,32691942..32692028,32692224..32692281,32692375..32692406,32692482..32692509,32692602..32692703,32692811..32692965,32693208..32693271,32693435..32693507,32693583..32693663,32693881..32693975,32694161..32694192,32694499..32694525))
Gene LOC106377583
GeneID 106377583
Organism Brassica napus

Protein

Length 804aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013817857.2
Definition DNA mismatch repair protein MSH5-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAAACGGAAACCGAATCGCAGGTTTATATGGCTTGCATTCAGCACGGTCGTCGAGTTGGAGTTTCGTACTACGACTGTAGTGTACGCCAGCTTCATGTGCTTGAATTTTGGGAGGAAGATTGCTCTGATTTTACTCTGATCAATATGGTCAAATATCAAGCGAAGCCATTGGTCATTTACACAAGCACCAAAAGTGAAGATTCCTTTGTATCCGCTCTGCACAAGAGTGATGGAACTGACGAGGATTCCACGGTGAAGCTGGTAAAGAGCTCAACATTCAGCTACGAGCAAGCGTGGCACAGGCTTGTATATCTTCGAGTAACAGGAATGGATGAAGGGCTAAACATCAAAGAACGGGTTTGTTATCTGAGTTCAATGATGGATGTAGGCAGTGAAGTCCAAGTTCGTGTTAGTGGGGGTCTTCTTGCCATATTAGAAAGCGAACGAATTGTAGATACCCTGGAACAAAACGAATCTGGGACAGCGTCAATTGCAATTGACTCAGTCATGGAAGTACCATTGAACAAGTTTCTTAAACTTGATGCAGCTGCTCACGAGGCACTACAGATATTTCAAACAGATAAACATCCAAGCCATATGGGCATTGGCAGGGCAAAAGAAGGGTTCTCGGTGTTTGGCATGATGAATAAGTGTGCCACACCAATGGGTAGACGGCTTTTAAGAAGCTGGTTTATGAGGCCAATTCTGGATCTTGAAGTGTTAGACCGTCGTCTCAATGCTATTACCTTTTTCATATCTTCTATAGAGCTGATGACATCTTTGCGGGATACACTGAAATCTGTGAAGGACATATCCCATTTGCTCAAGAAATTCAACTCCCCGACGTCCTTGTGTACCAGTAATGATTGGACAGCTTTTATGAAGAGTATAGGTGCGCTCTTGCGCGTGAATAAGATATTTGAAGTTGGAGTCTCAGAAAGTCTCCGAGAGCATATGAGACGCTTCAACTTAGACATTATTGAGAAGGCTGGCTTATGTATCAGCACAGAGCTAGATCATGTATATGAACTGGTACTTGGAGTCATTGATGTAACTAGATGCAAAGAGAAGGGTTATCAAACATTGGTTAAAGATGGATTCTGTGCTGAGTTGGATGAGCTGAGGCAAATATACGAGGAGTTGCCGGAGTTCCTGCAAGAGGTTTCATCGATGGAGTTTGAACACTTACCTCATCTGCATAAGGAGAATCTCCCTCCTTGTATTGTCTATATTCAACAAATTGGGTACCTCATGTGTATTTTTGGAGAAAAACTTGAAGAAATTGCACTTGATAGGATTAAAGAATTTGAATTTTCATTCTCTGATCTGGATGGGGAGACTCATCGATTCTTTTATCATACTCCAAAGACAAGAGAGTTAGACAACGTGCTTGGAGATATCTACCACAAAATTTTAGATATGGAGAGAGCTATTATAAGGGACTTGCTATCGCACACACTTTTGTTCTCGGCACACCTGTTGAAGGCAGTTAATTTTGTTGCAGAACTTGATTGCATTTTATCGTTGGCTTGTGTAGCCCATCAGAATAACTACGTAAGGCCTGTTCTGACAATGGAATCATTGCTTGATATTCGGAATGGAAGGCATGTTTTGCAGGAAATGGCAGTGGATACATTTATCCCCAACGATACTGAAATAAATGATAACGGTCGAATTCATATCATTACCGGTCCTAATTACTCAGGAAAGAGCATATATGTGAAGCAGGTGGCTTTAATTGTTTTCCTATCTCATATTGGAAGCTTTGTACCAGCAGATGCTGCAACTGTTGGTTTAACTGACAGGATCTTTTGTGCAATGGGAAGCAAGTTCATGACCGCGGAGCAATCTACATTTATGATTGATCTACATCAAGTGGGAATGATGCTAAGGCAGGCAACTTCAAGATCTCTGTGTCTCTTGGACGAGTTTGGTAAAGGCACTCTTACAGAAGATGGTATTGGCTTGCTTGGTGGGACAATTAGTCACTTTGCTTCATGTAATGAGCCACCAAGGGTTCTAGTATGCACCCACTTGACTGAACTACTTGACGAGAGCTGCTTGCCCGTTTCTGAGAAGATACGATTCTACACAATGAGCGTTCTGAGGCCAGATACAGAATCTGCAAACATGGAAGAAATTGTCTTTCTTTATCGGTTAATCCCGGGACAAACGCTGCTGAGTTACGGTCTACATTGTGCACTACTCGCTGGTGTCCCAGAGGAAGTGGTGAAGAGAGCAGCCATCGTGTTGGACATCTTTGAGAGTAACAACAACGTGGATAAACTTAACCTTGACAACATATCGTTTCAAGATCAAGCATTCAAGGATGCTGTTGACAAGTTTATGGAGTTTGATATCAGTAAAGGTGATATCCGTGCTTTCTTTGAAGACATGTTCACTTCTTAA
Protein:  
MEETETESQVYMACIQHGRRVGVSYYDCSVRQLHVLEFWEEDCSDFTLINMVKYQAKPLVIYTSTKSEDSFVSALHKSDGTDEDSTVKLVKSSTFSYEQAWHRLVYLRVTGMDEGLNIKERVCYLSSMMDVGSEVQVRVSGGLLAILESERIVDTLEQNESGTASIAIDSVMEVPLNKFLKLDAAAHEALQIFQTDKHPSHMGIGRAKEGFSVFGMMNKCATPMGRRLLRSWFMRPILDLEVLDRRLNAITFFISSIELMTSLRDTLKSVKDISHLLKKFNSPTSLCTSNDWTAFMKSIGALLRVNKIFEVGVSESLREHMRRFNLDIIEKAGLCISTELDHVYELVLGVIDVTRCKEKGYQTLVKDGFCAELDELRQIYEELPEFLQEVSSMEFEHLPHLHKENLPPCIVYIQQIGYLMCIFGEKLEEIALDRIKEFEFSFSDLDGETHRFFYHTPKTRELDNVLGDIYHKILDMERAIIRDLLSHTLLFSAHLLKAVNFVAELDCILSLACVAHQNNYVRPVLTMESLLDIRNGRHVLQEMAVDTFIPNDTEINDNGRIHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMGSKFMTAEQSTFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFASCNEPPRVLVCTHLTELLDESCLPVSEKIRFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLHCALLAGVPEEVVKRAAIVLDIFESNNNVDKLNLDNISFQDQAFKDAVDKFMEFDISKGDIRAFFEDMFTS